Group of Prof. Franz Bracher - Faculty for Chemistry and Pharmacy

RCSB Protein Data Bank

The Worldwide Protein Data Bank (wwPDB) consists of organizations that act as deposition, data processing and distribution centers for PDB data. The founding members are RCSB PDB (USA), PDBe (Europe) and PDBj (Japan) 1. The BMRB (USA) group joined the wwPDB in 2006. The mission of the wwPDB is to maintain a single Protein Data Bank Archive of macromolecular structural data that is freely and publicly available to the global community.

Crystal structures of the Bracher Group:

The crystal structures done in collaboration with Prof. Stefan Knapp, Structural Genomics Consortium (SGC), Oxford (www.sgc.ox.ac.uk), and with Prof. Oded Livnah, Jerusalem.

 

In collaboration with Prof. Stefan Knapp:  

PARP14 Macrodomain 2 with inhibitor

Authors: Uth, K., Schuller, M., Sieg, C., Wang, J., Krojer, T., Knapp, S., Riedels, K., Bracher, F., Edwards, A.M., Arrowsmith, C., Bountra, C., Elkins, J.M.
 

DOI: 10.2210/pdb5O2D/pdb
PDB code: 5O2D

Crystal structure of the bromodomain of human CREBBP in complex with a benzoxazepine compound

Authors: Tallant, C., Popp, T.A., Fedorov, O., Siejka, P., Picaud, S., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Bracher, F., Knapp, S., Structural Genomics Consortium
 

DOI: 10.2210/pdb5j0d/pdb
PDB code: 5J0D

Crystal structure of DYRK1A with harmine-derivatized AnnH-75 inhibitor

Authors: Chaikuad, A., Wurzlbauer, A., Nowak, R., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Bracher, F., Knapp, S.
 

DOI: 10.2210/pdb4yu2/pdb
PDB code: 4YU2

Crystal structure of Activin receptor type-IIA (ACVR2A) kinase domain in complex with a beta-carboline inhibitor

Authors: Williams, E., Chaikuad, A., Canning, P., Kochan, G., Mahajan, P., Cooper, C.D.O., Beltrami, A., Krojer, T., Pohl, B., Bracher, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Von Delfit, F., Bullock, A.
 

DOI: 10.2210/pdb4asx/pdb
PDB code: 4ASX

 

Crystal structure of the first bromodomain of human BRD4 in complex with a benzo-triazepine ligand (BzT-7)

Authors: Filippakopoulos, P., Picaud, S., Felletar, I., Fedorov, O., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Weigelt, J., Bountra, C., Bracher, F., Knapp, S.
 

DOI: 10.2210/pdb3u5l/pdb
PDB code: 3U5L

 

Crystal structure of the Human Clk3 in Complex with V25 (KH-CB19T)

Authors: Muniz, J.R.C., Fedorov, O., King, O., Filippakopoulos, P., Bullock, A., Phillips, C., Heightman, T., Ugochukwu, E., Von Delft, F., Arrowsmith, C.H., Bracher, F., Huber, K., Edwards, A.M., Weigelt, J., Bountra, C., Knapp, S.


DOI: 10.2210/pdb2wu7/pdb
PDB code: 2WU7

 

Crystal structure of human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and a beta carboline ligand II (KH-CARB13)

Authors: Filippakopoulos, P., Bullock, A., Fedorov, O., Huber, K., Bracher, F., Pike, A.C.W., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S.


DOI: 10.2210/pdb3cy2/pdb
PDB code: 3CY2

 

Crystal structure of human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and a beta carboline ligand (KH-CARB10)

Authors: Filippakopoulos, P., Bullock, A., Fedorov, O., Huber, K., Bracher, F., Pike, A.C.W., Roos, A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S.


DOI: 10.2210/pdb3cxw/pdb
PDB code: 3CXW

 

Crystal structure of Human Death Associated Protein Kinase 3 (DAPK3) in Complex with a Beta-Carboline Ligand (KH-CARB10)

Authors: Filippakopoulos, P., Rellos, P., Eswaran, J., Fedorov, O., Berridge, G., Niesen, F., Bracher, F., Huber, K., Pike, A.C.W., Roos, A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Weigelt, J., Knapp, S.


DOI: 10.2210/pdb3bhy/pdb
PDB code: 3BHY

 

Crystal structure of Di-Phosphorylated Human Clk1 in Complex with a Novel Substituted Indole Inhibitor (KH-CB19T)

Authors: Pike, A.C.W., Bullock, A., Fedorov, O., Pilka, E.S., Ugochukwu, E., Von Delft, F., Edwards, A., Arrowsmith, C.H., Weigelt, J., Sundstrom, M., Huber, K., Bracher, F., Knapp, S.


DOI: 10.2210/pdb2vag/pdb
PDB code: 2VAG

 

 
In collaboration with Prof. Oded Livnah:  

Crystal structure of di-phosphorylated human CLK1 in complex with 5-(6,7-dichloro-1H-indol-3-yl)pyrimidin-4-amine

Authors: Livnah, O., Domovich, Y., Bracher, F., Aigner, C.


DOI: 10.2210/pdb7oa0/pdb
PDB code: 7OA0

images-1.png

Crystal structure of di-phosphorylated human CLK1 in complex with 4-(1H-indol-3-yl)pyrimidin-2-amine

Authors: Livnah, O., Domovich, Y., Bracher, F., Aigner, C.


DOI: 10.2210/pdb7o9y/pdb
PDB code: 7O9Y

images-2.png

Non-phosphorylated human CLK1 in complex with an indole inhibitor to 1.65 Ang

Authors: Livnah, O., Domovich, Y.


DOI: 10.2210/pdb6qty/pdb
PDB code: 6QTY

Crystal structure of di-phosphorylated human CLK1 in complex with 4-(6,7-dichloro-1H-indol-3-yl)pyrimidin-2-amine

Authors: Livnah, O., Domovich, Y.


DOI: 10.2210/pdb6r3d/pdb
PDB code: 6R3D

Crystal structure of di-phosphorylated human CLK1 in complex with 5-(1-methyl-1H-indol-3-yl)pyrimidin-4-amine

Authors: Livnah, O., Domovich, Y.


DOI: 10.2210/pdb6r6x/pdb
PDB code: 6R6X

Crystal structure of di-phosphorylated human CLK1 in complex with 4-(1-methyl-1H-indol-3-yl)pyrimidin-2-amine

Authors: Livnah, O., Domovich, Y.


DOI: 10.2210/pdb6r8j/pdb
PDB code: 6R8J